rehh-package	rehh-package
allelefurcation	allelefurcation-class
allelefurcation-class	allelefurcation-class
as.newick	as.newick
calc_candidate_regions	calc_candidate_regions
calc_ehh	calc_ehh
calc_ehhs	calc_ehhs
calc_furcation	calc_furcation
calc_haplen	calc_haplen
calc_pairwise_haplen	calc_pairwise_haplen
calc_region_stats	calc_region_stats
calc_sfs_tests	calc_sfs_tests
chr.name	haplohh-class
chr.name,	haplohh-class
chr.name,haplohh-method	haplohh-class
data2haplohh	data2haplohh
distribplot	distribplot
ehh	calc_ehh
ehh-class	calc_ehh
ehhs	calc_ehhs
ehhs-class	calc_ehhs
extract_regions	extract_regions
freqbinplot	freqbinplot
ftree	ftree-class
ftree-class	ftree-class
furcation	furcation-class
furcation-class	furcation-class
hap.names	haplohh-class
hap.names,	haplohh-class
hap.names,haplohh-method	haplohh-class
haplen	haplen-class
haplen-class	haplen-class
haplo	haplohh-class
haplo,	haplohh-class
haplo,haplohh-method	haplohh-class
haplohh-class	haplohh-class
haplohh2sweepfinder	haplohh2sweepfinder
haplohh_cgu_bta12	haplohh_cgu_bta12
ies2xpehh	ies2xpehh
ihh2ihs	ihh2ihs
ines2rsb	ines2rsb
make.example.files	make.example.files
manhattanplot	manhattanplot
mrk.names	haplohh-class
mrk.names,	haplohh-class
mrk.names,haplohh-method	haplohh-class
nhap	haplohh-class
nhap,	haplohh-class
nhap,haplohh-method	haplohh-class
nmrk	haplohh-class
nmrk,	haplohh-class
nmrk,haplohh-method	haplohh-class
plot.ehh	plot.ehh
plot.ehhs	plot.ehhs
plot.furcation	plot.furcation
plot.haplen	plot.haplen
plot.haplohh	plot.haplohh
positions	haplohh-class
positions,	haplohh-class
positions,haplohh-method	haplohh-class
rehh	rehh-package
remove.example.files	remove.example.files
scan_hh	scan_hh
scan_hh_full	scan_hh_full
subset.haplohh	subset.haplohh
update_haplohh	update_haplohh
