Last updated on 2025-11-25 04:50:19 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.68 | 238.22 | 250.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.24 | 273.43 | 283.67 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.55 | 253.78 | 269.33 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 23.00 | 347.00 | 370.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 18.00 | 282.00 | 300.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 226.00 | 249.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [97s/257s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.018, system: 0.166, elapsed: 5.475 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.817, system: 0.799, elapsed: 31.996 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.030, elapsed: 0.490 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.482, system: 0.410, elapsed: 21.479 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.011, elapsed: 0.719 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.434, system: 1.786, elapsed: 62.844 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.831, system: 0.108, elapsed: 6.751 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.274, system: 0.352, elapsed: 41.974 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.029, elapsed: 0.467 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.285, system: 0.272, elapsed: 8.322 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.009, elapsed: 0.422 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.477, system: 1.092, elapsed: 60.672 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.831, system: 0.078, elapsed: 4.185 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.155, system: 0.316, elapsed: 20.856 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.035, elapsed: 1.372 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.505, system: 0.474, elapsed: 15.803 seconds]
Computing values for grid cells...
... done. [user: 0.208, system: 0.030, elapsed: 0.541 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.421, system: 0.426, elapsed: 2.776 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.123, system: 1.574, elapsed: 48.068 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.875, system: 0.112, elapsed: 4.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.298, system: 0.384, elapsed: 24.331 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.021, elapsed: 0.405 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.261, system: 0.283, elapsed: 10.267 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.013, elapsed: 0.493 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.684, system: 0.914, elapsed: 28.152 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.259, system: 1.809, elapsed: 70.137 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [93s/212s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.013, system: 0.150, elapsed: 5.644 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.409, system: 0.520, elapsed: 25.605 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.020, elapsed: 0.308 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.247, system: 0.325, elapsed: 8.002 seconds]
Computing values for grid cells...
... done. [user: 0.202, system: 0.015, elapsed: 0.628 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.700, system: 1.115, elapsed: 41.838 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.849, system: 0.088, elapsed: 4.016 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.045, system: 0.244, elapsed: 18.738 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.021, elapsed: 0.630 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.215, system: 0.288, elapsed: 13.918 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.011, elapsed: 0.737 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.090, system: 0.709, elapsed: 39.644 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.916, system: 0.111, elapsed: 9.857 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.073, system: 0.300, elapsed: 31.407 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.024, elapsed: 0.389 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.077, system: 0.288, elapsed: 9.435 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.013, elapsed: 0.521 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.207, system: 0.310, elapsed: 2.056 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.429, system: 1.310, elapsed: 56.676 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.664, system: 0.043, elapsed: 3.146 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.174, system: 0.325, elapsed: 22.167 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.032, elapsed: 0.552 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.137, system: 0.330, elapsed: 8.219 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.409 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.420, system: 0.681, elapsed: 24.130 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.564, system: 1.705, elapsed: 61.145 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64