Last updated on 2026-02-09 04:49:58 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.81 | 248.21 | 261.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.57 | 205.71 | 216.28 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 298.75 | 324.75 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 28.00 | 350.39 | 378.39 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.62 | 258.92 | 272.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 252.72 | 266.88 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 461.00 | 473.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 189.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 913.00 | 924.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 245.00 | 270.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [115s/386s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.784, system: 0.120, elapsed: 3.074 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.897, system: 0.326, elapsed: 26.765 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.026, elapsed: 0.876 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.001, system: 1.054, elapsed: 17.017 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.007, elapsed: 0.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.705, system: 1.582, elapsed: 48.859 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.933, system: 0.152, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.311, elapsed: 14.055 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.360, system: 0.039, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 10.511, system: 1.141, elapsed: 8.039 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.006, elapsed: 0.172 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.179, system: 1.944, elapsed: 26.147 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.056, elapsed: 1.549 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.884, system: 0.233, elapsed: 10.052 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.401, system: 0.049, elapsed: 0.683 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 9.870, system: 1.228, elapsed: 7.572 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.012, elapsed: 0.247 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.390, system: 0.483, elapsed: 1.835 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.253, system: 2.149, elapsed: 22.719 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.006, system: 0.133, elapsed: 6.388 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.803, system: 0.248, elapsed: 29.854 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.025, elapsed: 1.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.016, system: 1.423, elapsed: 177.214 seconds]
Computing values for grid cells...
... done. [user: 0.193, system: 0.016, elapsed: 0.580 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.600, system: 0.856, elapsed: 59.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.700, system: 2.876, elapsed: 276.924 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.647, system: 0.054, elapsed: 5.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.872, system: 0.235, elapsed: 33.559 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.230, system: 0.027, elapsed: 1.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.735, system: 1.800, elapsed: 178.476 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.013, elapsed: 0.802 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.305, system: 2.286, elapsed: 222.476 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.734, system: 0.071, elapsed: 6.030 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.123, elapsed: 30.905 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.022, elapsed: 1.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.592, system: 1.682, elapsed: 181.034 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.011, elapsed: 0.547 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.029, system: 2.109, elapsed: 222.514 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.670, system: 0.058, elapsed: 4.594 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.559, system: 0.080, elapsed: 29.672 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.022, elapsed: 1.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.638, system: 1.481, elapsed: 143.377 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.018, elapsed: 0.282 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.345, system: 0.451, elapsed: 1.955 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.338, system: 2.292, elapsed: 183.273 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.762, system: 0.072, elapsed: 3.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.890, system: 0.262, elapsed: 17.153 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.232, system: 0.032, elapsed: 1.038 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.134, system: 1.102, elapsed: 73.542 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.008, elapsed: 0.267 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.630, system: 0.773, elapsed: 46.845 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 32.749, system: 2.599, elapsed: 145.033 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64