TotalCopheneticIndex: Quantify the Balance of Phylogenetic Trees
Measures the degree of balance for a given phylogenetic tree by calculating the Total Cophenetic Index. Reference: A. Mir, F. Rossello, L. A. Rotger (2013). A new balance index for phylogenetic trees. Math. Biosci. 241, 125-136 <doi:10.1016/j.mbs.2012.10.005>.
| Version: | 2.0.1 |
| Depends: | R (≥ 3.4.0) |
| Imports: | TreeTools (≥ 1.4.5) |
| Suggests: | ape, testthat |
| Published: | 2021-06-23 |
| DOI: | 10.32614/CRAN.package.TotalCopheneticIndex |
| Author: | Martin R. Smith 
[aut, cre, cph] |
| Maintainer: | Martin R. Smith <martin.smith at durham.ac.uk> |
| BugReports: | https://github.com/ms609/TreeTools/issues/ |
| License: | Unlimited |
| URL: | https://github.com/ms609/tci/ |
| NeedsCompilation: | no |
| Language: | en-GB |
| Citation: | TotalCopheneticIndex citation info |
| Materials: | README, NEWS |
| CRAN checks: | TotalCopheneticIndex results |
Documentation:
| Reference manual: | TotalCopheneticIndex.html , TotalCopheneticIndex.pdf |
Downloads:
| Package source: | TotalCopheneticIndex_2.0.1.tar.gz |
| Windows binaries: | r-devel: TotalCopheneticIndex_2.0.1.zip, r-release: TotalCopheneticIndex_2.0.1.zip, r-oldrel: TotalCopheneticIndex_2.0.1.zip |
| macOS binaries: | r-release (arm64): TotalCopheneticIndex_2.0.1.tgz, r-oldrel (arm64): TotalCopheneticIndex_2.0.1.tgz, r-release (x86_64): TotalCopheneticIndex_2.0.1.tgz, r-oldrel (x86_64): TotalCopheneticIndex_2.0.1.tgz |
| Old sources: | TotalCopheneticIndex archive |
Linking:
Please use the canonical form https://CRAN.R-project.org/package=TotalCopheneticIndex to link to this page.